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Retrieved Entries: 467 [» Advanced search reports]
@inproceedings{
author = {Devendra Kumar Jangid and Neal R Brodnik and McLean P Echlin and Samantha Daly and Tresa Pollock and B.S. Manjunath},
title = {Titanium 3D Microstructure for Physics-based Generative Models: A Dataset and Primer},
booktitle = {International Conference on Machine Learning Workshop},
location = {Hawaii, USA},
month = {Aug},
year = {2023},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/titanium_3d_microstructure_for_physics-based0agenerative_models_a_dataset_and_primer.pdf},
}
@unpublished{
author = {Devendra K. Jangid and Neal R. Brodnik and McLean P. Echlin and Tresa M. Pollock and Samantha H. Daly and B.S. Manjunath},
title = {Q-RBSA: High-Resolution 3D EBSD Map Generation Using An Efficient Quaternion Transformer Network},
booktitle = {},
month = {Mar},
year = {2023},
url = {https://arxiv.org/abs/2303.10722},
}
@article{
author = {Devendra K Jangid and Neal R Brodnik and Michael G Goebel and Amil Khan and SaiSidharth Majeti and McLean P Echlin and Samantha H Daly and Tresa M Pollock and BS Manjunath},
title = {Adaptable physics-based super-resolution for electron backscatter diffraction maps},
journal = {NPJ Computational Materials},
month = {Dec},
year = {2022},
url = {https://www.nature.com/articles/s41524-022-00924-2},
}
@article{
author = {Devendra K. Jangid and Neal R. Brodnik and Amil Khan and Michael G. Goebel and McLean P. Echlin and Tresa M. Pollock and Samantha H. Daly & B. S. Manjunath},
title = {3D Grain Shape Generation in Polycrystals Using Generative Adversarial Networks},
journal = {Integrating Materials and Manufacturing Innovation},
month = {Jan},
year = {2022},
url = {https://link.springer.com/article/10.1007/s40192-021-00244-1},
}
@inproceedings{
author = {Devendra K. Jangid and Neal R. Brodnik and Amil Khan and McLean P. Echlin and Tresa M. Pollock and Sam Daly and B.S. Manjunath},
title = {3DMaterialGAN: Learning 3D Shape Representation from Latent Space for Materials Science Applications},
booktitle = {arXiv},
month = {Jul},
year = {2020},
url = {https://arxiv.org/pdf/2007.13887.pdf},
}
@inproceedings{
author = {Satish Kumar and Carlos Torres and Oytun Ulutan and Alana Ayasse and Dar Roberts and B. S. Manjunath},
title = {Deep Remote Sensing Methods for Methane Detection in Overhead Hyperspectral Imagery},
booktitle = {The IEEE Winter Conference on Applications of Computer Vision (WACV) 2020},
month = {Mar},
year = {2020},
url = {http://openaccess.thecvf.com/content_WACV_2020/papers/Kumar_Deep_Remote_Sensing_Methods_for_Methane_Detection_in_Overhead_Hyperspectral_WACV_2020_paper.pdf},
}
@article{Xu12-400
author = {Jiejun Xu and Vignesh Jagadeesh 2nd B.S. Manjunath},
title = {Multi-label Learning with Fused Multimodal Bi-relational Graph},
journal = {IEEE Transaction on Multimedia},
volume = {16},
number = {2},
pages = {403--412},
month = {Feb},
year = {2014},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/2014_tmm_jiejun.pdf},
}
@inproceedings{Baddeley12-421
author = {A. Baddeley and A. Jammalamadaka and G. Nair},
title = {Multitype point process analysis of spines on the dendrite network of a neuron},
booktitle = {Journal of Royal Statistical Society},
volume = {Series C (Applied Statistics)},
month = {Feb},
year = {2014},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/2014_jrs_baddeley_0.pdf},
}
@inproceedings{Karthikeyan12-422
author = {S. Karthikeyan and Vignesh Jagadeesh and Renuka Shenoy and Miguel Eckstein and B.S. Manjunath},
title = {From Where and How to What We See},
booktitle = {IEEE International Conference on Computer Vision},
location = {Sydney},
month = {Dec},
year = {2013},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/2013_iccv_karthik.pdf},
}
@inproceedings{Nataraj12-423
author = {Lakshmnanan Nataraj and Dhilung Kirat and B.S. Manjunath and Giovanni Vigna},
title = {SARVAM: Search And RetrieVAl of Malware},
booktitle = {Annual Computer Security Applications Conference (ACSAC) Workshop on Next Generation Malware Attacks and Defense (NGMAD)},
location = {New Orleans},
month = {Dec},
year = {2013},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/2013_sarvam_ngmad_0.pdf},
}
@article{10-360
author = {A.H.K. Roeder and V. Chickarmane and A.Cunha and B. Obara and B.S. Manjunath and E.M. Meyerowitz},
title = {Variability in the Control of Cell Division Underlies Sepal Epidermal Patterning in Arabidopsis thaliana},
journal = {PLoS Biology},
volume = {8},
number = {5},
pages = {e1000367},
month = {May},
year = {2010},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/roeder_plos_apr_2010.pdf},
}
@inproceedings{Bertelli06-234
author = {Luca Bertelli and Baris Sumengen and B.S. Manjunath},
title = {Redundancy in All Pairs Fast Marching Method},
booktitle = {IEEE International Conference on Image Processing 2006 (ICIP06)},
location = {Atlanta, GA USA},
month = {Oct},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/bertelli_redundancy_ICIP06.pdf},
}
@inproceedings{Fedorov06-227
author = {Dmitry Fedorov and Baris Sumengen and B. S. Manjunath},
title = {Multi-Focus Imaging using Local Focus Estimation and Mosaicking},
booktitle = {IEEE International Conference on Image Processing 2006 (ICIP06)},
location = {Atlanta, GA USA},
month = {Oct},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/fedorov_focus_icip2006.pdf},
}
@article{Byun06-226
author = {Jiyun Byun and Mark R. Verardo and Baris Sumengen and Geoffrey P. Lewis and B. S. Manjunath and Steven K. Fisher},
title = {Automated tool for the detection of cell nuclei in digital microscopic images: Application to retinal images},
journal = {Molecular Vision},
location = {http://www.molvis.org/molvis/v12/a107/},
volume = {12},
pages = {949--960},
month = {Aug},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/jiyun_MolecularVision2006.pdf},
}
@inproceedings{Altinok06-236
author = {Alphan Altinok and Motaz El-Saban and Austin Peck and Leslie Wilson and Stuart Feinstein and B.S Manjunath and Kenneth Rose},
title = {Activity Analysis in Microtubule Videos by Mixture of Hidden Markov Models},
booktitle = {International Conference on Computer Vision and Pattern Recognition (CVPR)},
location = {New York, NY},
month = {Jun},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/Altinok_cvpr06.pdf},
}
@inproceedings{Sumengen06-235
author = {Baris Sumengen and Luca Bertelli and B.S. Manjunath},
title = {Fast and Adaptive Pairwise Similarities for Graph Cuts-based Image Segmentation},
booktitle = {IEEE CVPR Workshop on Perceptual Organization in Computer Vision (POCV)},
location = {New York City},
month = {Jun},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/sumengen_similarities_techrep.pdf},
}
@inproceedings{El-Saban06-237
author = {Motaz El-Saban and Alphan Altinok and Austin Peck and Charles Kenney and Stuart Feinstein and Leslie Wilson and Kenneth Rose and B.S Manjunath},
title = {Automated tracking and modeling of microtubule dynamics},
booktitle = {IEEE International Symposium on Biomedical Imaging (ISBI)},
location = {Crystal City, CA},
month = {Apr},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/saban_ISBI06.pdf},
}
@inproceedings{Verardo06-232
author = {M.R. Verardo and G.P. Lewis and M. Takeda and K.A. Linberg and U. Wilhelmsson and M. Pekny and D.F. Chen and S.K. Fisher},
title = {Lack of Intermediate Filaments in GFAP -/-vim-/- Mice leads to Changes in Mueller Cell Endfeet and Ganglion Cells Following Retinal Detachment},
booktitle = {Invest Ophthalmol Vision Science 2006;47: Association for Research in Vision and Ophthalmology (ARVO) E-Abstract 4225},
location = {Fort Lauderdale, Florida, USA},
month = {Apr},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/Verardo2_ARVO_2006.pdf},
}
@inproceedings{Fisher06-225
author = {S. K. Fisher and J. Byun and D. Fedorov and N. Vu and B. Sumengen and M. Verardo and G. P. Lewis and B. S. Manjunath},
title = {Image Informatics Tools for the analysis of Retinal Images},
booktitle = {Invest Ophthalmol Vision Science 2006;47: Association for Research in Vision and Ophthalmology (ARVO) E-Abstract 4225},
location = {Fort Lauderdale, Florida, USA},
month = {Apr},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/fisher_RCB_2006.pdf},
}
@inproceedings{Manjunath06-224
author = {B. S. Manjunath and B. Sumengen and Z. Bi and J. Byun and M. El-Saban and D. Fedorov and N. Vu},
title = {Towards Automated Bioimage Analysis: From Features to Semantics},
booktitle = {IEEE International Symposium on Biomedical Imaging (ISBI)},
location = {Crystal City, CA},
pages = {255--258},
month = {Apr},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/Manjunath_taba_ISBI06.pdf},
}
@inproceedings{Byun06-223
author = {J. Byun and N. Vu and B. Sumengen and B. S. Manjunath},
title = {Quantitative analysis of immunofluorescent retinal images},
booktitle = {IEEE International Symposium on Biomedical Imaging (ISBI)},
location = {Crystal City, CA},
pages = {1268--1271},
month = {Apr},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/Byun_qairi_ISBI06.pdf},
}
@inproceedings{Ljosa05-214
author = {Vebjorn Ljosa and Arnab Bhattacharya and Ambuj K. Singh},
title = {LB-Index: A Multi-Resolution Index Structure for Images},
booktitle = {22nd International Conference on Data Engineering (ICDE)},
month = {Apr},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/ljosa_icde_2006.pdf},
}
@phdthesis{El-Saban06-246
author = {Motaz El-Saban},
title = {Automated Microtubule Tracking and Analysis},
booktitle = {Ph.D. Thesis},
location = {University of California, Santa Barbara},
month = {Mar},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/05ThesisSaban.pdf},
}
@techreport{Siddiqi06-243
author = {Md. Aleemuddin Siddiqi and S. Rao Jammalamadaka},
title = {Analysis of Microtubules using Growth Curve Modeling},
booktitle = {VRL, ECE, UCSB},
month = {Mar},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/siddiqi_microtubule.pdf},
}
@techreport{Frame06-240
author = {Samuel J. Frame and S. Rao Jammalamadaka},
title = {Semi-Supervised Learning and Generalized Mixture Models in the analysis of Retinal Images},
booktitle = {Center for Bio-Image Informatics, UCSB},
month = {Mar},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/Frame_ITR_2005.pdf},
}
@inproceedings{Ljosa06-222
author = {Vebjorn Ljosa and Arnab Bhattacharya and Ambuj K. Singh},
title = {Indexing Spatially Sensitive Distance Measures Using Multi-Resolution Lower Bounds},
booktitle = {10th International Conference on Extending Database Technology (EDBT)},
month = {Mar},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/ljosa_edbt_2006.pdf},
}
@article{Manna06-229
author = {Tapas Manna and Douglas Thrower and Herbert P. Miller and Patrick Curmi and Leslie Wilson},
title = {Stathmin Strongly Increases the Minus End Catastrophe Frequency and Induces Rapid Treadmilling of Bovine Brain Microtubules at Steady State in Vitro},
journal = {The Journal of Biological Chemistry},
volume = {281},
number = {4},
pages = {2071â2078},
month = {Jan},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/Manna_Wilson_StathminJBC2006.pdf},
}
@book{Altinok06-239
author = {Alphan Altinok and Austin Peck and Kenneth Rose},
title = {Computational Methods for Analyzing Patterns in Dynamic},
publisher = {Biological Phenomena: An Application to Microtubule Dynamics},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/altinok_ASCB06.pdf},
}
@techreport{Altinok06-238
author = {Alphan Altinok and Baris Sumengen and B.S Manjunath and Kenneth Rose},
title = {Reducing incidental fluorescence in live cell imaging},
booktitle = {ECE, UCSB},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/Altinok_ISBI06.pdf},
}
@techreport{Bi06-233
author = {Zhiqiang Bi and B.S. Manjunath},
title = {Analysis Of Confocal Microscope Images From Retina Detachment Experiments Using Texture Bases Features},
booktitle = {VRL, ECE, UCSB},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/bi_analysis_ICIP06.pdf},
}
@article{Bunker06-230
author = {Janis M. Bunker and Kathy Kamath and Leslie Wilson and Mary Ann Jordan and and Stuart C. Feinstein},
title = {Ftdp-17 Mutations Compromise the Ability of Tau to Regulate Microtubule Dynamics In Cells},
journal = {The Journal of Biological Chemistry},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/Bunker_et_al_2006.pdf},
}
@techreport{Fedorov05-228
author = {Dmitry Fedorov and Baris Sumengen and B. S. Manjunath},
title = {Tile-based framework for local enhancement of bio imagery},
booktitle = {VRL, ECE, UCSB},
month = {Dec},
year = {2005},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/fedorov_enhance_techrep.pdf},
}
@inproceedings{Bhattacharya05-215
author = {Arnab Bhattacharya and Vebjorn Ljosa and Jia-Yu Pan and Mark R. Verardo and Hyungjeong Yang and Christos Faloutsos and Ambuj K. Singh},
title = {ViVo: Visual vocabulary construction for mining biomedical images},
booktitle = {Fifth IEEE International Conference on Data Mining (ICDM)},
pages = {50--57},
month = {Nov},
year = {2005},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/bhattacharya_icdm_2005.pdf},
}
@inproceedings{Coulier05-244
author = {Robert John Coulier},
title = {A Storage, Processing, and Retrieval System for Microtubule Tracking Data},
booktitle = {IEEE Computational Systems Bioinformatics Conference},
location = {Stanford University, CA},
month = {Aug},
year = {2005},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/coulierr_CSB2005.pdf},
}
@inproceedings{Singh05-213
author = {Ambuj K. Singh and Arnab Bhattacharya and Vebjorn Ljosa},
title = {Current Challenges in Bioimage Database Design},
booktitle = {International Workshop on Bioimage Data Mining and Informatics},
location = {IEEE Computational Systems Bioinformatics Conference (CSB)},
pages = {375--379},
month = {Aug},
year = {2005},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/singh_csb_2005.pdf},
}
@techreport{Saban05-242
author = {M. A. El Saban and B. S. Manjunath},
title = {Spatiotemporal Contour Tracking of Microtubules},
booktitle = {VRL, ECE, UCSB},
month = {Jun},
year = {2005},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/saban_cvpr06.pdf},
}
@techreport{Saban05-241
author = {M. A. El Saban and B. S. Manjunath},
title = {Tracking curvilinear structures using active contours and application to microtubule videos},
booktitle = {VRL, ECE, UCSB},
month = {Jun},
year = {2005},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/saban_icip2005.pdf},
}
@article{Fisher05-231
author = {Steven K. Fisher and Geoffrey P. Lewis and Kenneth A. Linberg and Mark R. Verardo},
title = {Cellular remodeling in mammalian retina: results from studies of experimental retinal detachment},
journal = {Progress in Retinal and Eye Research},
volume = {25},
pages = {395--431},
year = {2005},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/fisher_PRER_2005.pdf},
}
@inproceedings{Verardo05-210
author = {M.R. Verardo and G.P. Lewis and M. Takeda and K.A. Linberg and B. Wardak and M. Rabena},
title = {Retinal Detachment in Mice Deficient in GFAP and Vimentin: Reduced Glial Hypertrophy and Increased Ganglion Cell Remodeling},
booktitle = {International Symposium on Neural Regeneration},
year = {2005},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/Verardo_ISNR_2005.pdf},
}
@inproceedings{Verardo05-209
author = {M.R. Verardo and G.P. Lewis and M. Takeda and B.M. Wardak and M.D. Rabena and D.F. Chen and S.K. Fisher},
title = {Glial Hypertrophy and Neuronal Remodeling in Mice Deficient in GFAP and Vimentin Following Experimental Retinal Detachment},
booktitle = {Invest Ophthalmol Vision Science 2004;45: Association for Research in Vision and Ophthalmology (ARVO) E-Abstract 3000},
location = {Fort Lauderdale, Florida, USA},
year = {2005},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/Verardo_ARVO_2006.pdf},
}
BIO, Bio-Image Informatics and BISQUE
@inproceedings{
author = {Enrique Alegre and MT Garcia-Ordas and Victor Gonzalez-Castro and S Karthikeyan},
title = {Vitality assessment of boar sperm using NCSR texture descriptor in digital images},
booktitle = {},
month = {Sep},
year = {2012},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/ibpria2011_1.pdf},
}
Detection on Images and Videos
@inproceedings{
author = {R. Austin McEver and Bowen Zhang and Connor Levenson and A S M Iftekhar and B.S. Manjunath},
title = {Context-Driven Detection of Invertebrate Species in Deep-Sea Video},
booktitle = {CVPR Workshop},
location = {New Orleans, LA},
month = {Jun},
year = {2022},
url = {https://www.austinmcever.com/CDD4DUSIA},
}
@inproceedings{
author = {Thuyen Ngo and B.S. Manjunath},
title = {Saccade Gaze Prediction Using a Recurrent Neural Network},
booktitle = {IEEE International Conference on Image Processing},
location = {Beijing, China},
month = {Sep},
year = {2017},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/2017_icip_thuyen.pdf},
}
@inproceedings{
author = {Archith J. Bency and Swati Rallapalli and Raghu K. Ganti and Mudhakar Srivatsa and and B. S. Manjunath},
title = {Beyond Spatial Auto-Regressive Models: Predicting Housing Prices with Satellite Imagery},
booktitle = {IEEE Winter Conference on Applications of Computer Vision 2017},
location = {Santa Rosa, CA},
pages = {320--329},
month = {Mar},
year = {2017},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/bency_wacv_17.pdf},
}
@inproceedings{
author = {Archith J Bency and Heesung Kwon and H Lee and S Karthikeyan and B.S. Manjunath},
title = {Weakly supervised localization using deep feature maps},
booktitle = {Proc. European Conference on Computer Vision},
location = {Amsterdam, Netherlands},
pages = {714--731},
month = {Oct},
year = {2016},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/2016bencyweaksupervised.pdf},
}
@inproceedings{
author = {Amir M Rahimi and R Ruschel and BS Manjunath},
title = {UAV Sensor Fusion with Latent Dynamic Conditional Random Fields in Coronal Plane Estimation},
booktitle = {IEEE International Conference on Computer Vision and Pattern Recognition},
location = {Las Vegas, NV},
month = {Jun},
year = {2016},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/cvpr_2016_coronal_plane_estimation_crf.pdf},
}
@inproceedings{
author = {A. M. Rahimi and L. Nataraj and B.S. Manjunath},
title = {Features We trust!},
booktitle = {International Conference on Image Processing},
location = {Quebec City, Canada},
pages = {3476--80},
month = {Sep},
year = {2015},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/07351450.pdf},
}
@inproceedings{
author = {S. Karthikeyan and Thuyen Ngo and Miguel Eckstein and B.S. Manjunath},
title = {Eye tracking assisted extraction of attentionally important objects from videos},
booktitle = {IEEE International Conference on Computer Vision and Pattern Recognition},
location = {Boston, MA},
month = {Jun},
year = {2015},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/cvpr_2015_karthikeyan.pdf},
}
@phdthesis{
author = {S. Karthikeyan},
title = {Modeling Eye Tracking Data with Application to Object Detection},
booktitle = {},
month = {Sep},
year = {2014},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/karthikeyan_thesis.pdf},
}
@inproceedings{
author = {A. M. Rahimi and R.J. Miller and D.V. Fedorov and S. Sunderrajan and B.M. Doheny and H.M. Page and B.S. Manjunath},
title = {Marine Biodiversity Classification Using Dropout Regularization},
booktitle = {2014 ICPR Workshop on Computer Vision for Analysis of Underwater Imagery (CVAUI),},
location = {Stockholm},
pages = {80--87},
month = {Aug},
year = {2014},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/2014_amir_icpr_workshop.pdf},
}
@article{Jagadeesh12-413
author = {Vignesh Jagadeesh and James Anderson and Bryan Jones and Robert Marc and Steven Fisher and B.S. Manjunath},
title = {Robust Segmentation based Tracing using an Adaptive Wrapper for Inducing Priors},
journal = {IEEE Transactions on Image Processing},
volume = {22},
number = {12},
pages = {4952--4963},
month = {Dec},
year = {2013},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/2013_tip_vignesh.pdf},
}
@article{Xu12-401
author = {Jiejun Xu and Vignesh Jagadeesh and Zefeng Ni and Santhoshkumar Sunderrajan and B.S. Manjunath},
title = {Graph-based Topic-focused Retrieval in a Distributed Camera Network},
journal = {IEEE Transaction on Multimedia},
volume = {15},
number = {8},
pages = {2046--2057},
month = {Dec},
year = {2013},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/2013_tmm_jiejun},
}
@article{Jagadeesh12-411
author = {Vignesh Jagadeesh and James Anderson and Bryan Jones and Robert Marc and Steven K Fisher and B.S Manjunath},
title = {Synapse Classification and Localization in Electron Micrographs},
journal = {Pattern Recognition Letters},
volume = {43},
pages = {17--24},
month = {Nov},
year = {2013},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/2013_pr_vignesh.pdf},
}
@inproceedings{Delibaltov12-399
author = {Diana Delibaltov and Pratim Ghosh and Volkan Rodoplu and Michael Veeman and William Smith and B.S. Manjunath},
title = {A Linear Program Formulation for the Segmentation of Ciona Membrane Volumes},
booktitle = {International Conference on Medical Image Computing and Computer Assisted Intervention},
month = {Sep},
year = {2013},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/diana_miccai_2013.pdf},
}
@inproceedings{Karthikeyan12-398
author = {S. Karthikeyan and Vignesh Jagadeesh and B. S. Manjunath},
title = {Learning Bottom-Up Text Attention Maps For Text Detection Using Stroke Width Transform},
booktitle = {IEEE International Conference on Image Processing},
month = {Sep},
year = {2013},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/karthik_icip_2013b.pdf},
}
@techreport{Vu12-409
author = {Nhat Vu and Vignesh Jagadeesh and and B.S.Manjunath},
title = {Mutilabel MRFs with Label Adjacency Constraint: Globally Optimal Solutions and Applications},
booktitle = {VRL, ECE},
location = {University of California, Santa Barbara},
month = {Jun},
year = {2013},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/2013_tr_nhat.pdf},
}
@inproceedings{Fick12-412
author = {R.H.J. Fick and D. Fedorov and A.H.K. Roeder and B.S. Manjunath},
title = {Simultaneous cell tracking and image alignment in 3D CLSM imagery of growing Arabidopsis thaliana sepals},
booktitle = {10th International Symposium on Biomedical Imaging (ISBI)},
pages = {914--917},
month = {Apr},
year = {2013},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/fick_isbi2013.pdf},
}
@article{Ghosh12-385
author = {Pratim Ghosh and B.S. Manjunath},
title = {Robust Simultaneous Registration and Segmentation with Sparse Error Reconstruction},
journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
volume = {35},
number = {2},
month = {Feb},
year = {2013},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/pratim_pami_2013.pdf},
}
@inproceedings{Delibaltov12-396
author = {Diana Delibaltov and S. Karthikeyan and Vignesh Jagadeesh and B. S. Manjunath},
title = {Robust Biological Image Sequence Analysis Using Graph Based Approaches},
booktitle = {Asilomar Conference On Signals, Systems and Computers (ACSSC)},
location = {Monterey, CA},
month = {Nov},
year = {2012},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/diana_asilomar2012.pdf},
}
@inproceedings{Jagadeesh11-373
author = {V Jagadeesh and N Vu and B.S. Manjunath},
title = {Multiple Structure Tracing in 3D Electron Micrographs},
booktitle = {Medical Image Computing and Computer Assisted Intervention (MICCAI)},
location = {Toronto, Canada},
month = {Sep},
year = {2011},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/miccai2011},
}
@article{Obara11-381
author = {B. Obara and M. Veeman and J.H. Choi and W. Smith and B.S. Manjunath},
title = {Segmentation of ascidian notochord cells in DIC timelapse images},
journal = {Microscopy Research and Technique},
volume = {74},
number = {8},
pages = {727--734},
month = {Aug},
year = {2011},
}
@article{Kiris11-382
author = {E. Kiris and D. Ventimiglia and M.E. Sargin and M.R. Gaylord and A. Altinok and K. Rose and B.S. Manjunath and M.A. Jordan and L. Wilson and S.C. Feinstein},
title = {Combinatorial Tau Pseudophosphorylation},
journal = {The Journal of Biological Chemistry},
volume = {286},
number = {16},
pages = {14257--14270},
month = {Apr},
year = {2011},
}
@inproceedings{abdollahian11-370
author = {G. Abdollahian and M. Veeman and W. Smith and B.S. Manjunath},
title = {A curvicylindrical coordinate system for The Visualization and Segmentation of The Ascidian Tail},
booktitle = {2011 IEEE International Symposium on Biomedical Imaging (ISBI)},
location = {Chicago},
month = {Apr},
year = {2011},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/2011abdollahian.pdf},
}
@inproceedings{delibaltov11-369
author = {Diana Delibaltov and Pratim Ghosh and Michael Veeman and William Smith and and B.S. Manjunath},
title = {AN AUTOMATIC FEATURE BASED MODEL FOR CELL SEGMENTATION FROM CONFOCAL MICROSCOPY VOLUMES},
booktitle = {2011 IEEE International Symposium on Biomedical Imaging (ISBI)},
location = {Chicago},
month = {Apr},
year = {2011},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/2011diana.pdf},
}
@article{Bertelli10-363
author = {Luca Bertelli and Shivkumar Chandrasekaran and Frederic Gibou and B.S. Manjunath},
title = {On the Length and Area Regularization for Multiphase Level Set Segmentation},
journal = {International Journal on Computer Vision},
volume = {90},
number = {3},
pages = {267--282},
month = {Dec},
year = {2010},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/10IJCVBertelli.pdf},
}
@article{Piedrahita2010-368
author = {Diego Piedrahita and Israel Hernandez and Alejandro Lopez-Tobon and Dmitry Fedorov and Boguslaw Obara and B. S. Manjunath and Ryan L. Boudreau and Beverly Davidson and Frank LaFerla and Juan Carlos Gallego-Gomez and Kenneth S. Kosik and and Gloria Patricia Cardona-Gomez},
title = {Silencing of CDK5 Reduces Neurofibrillary Tangles in Transgenic Alzheimer's Mice},
journal = {Journal of Neuroscience},
volume = {30},
number = {42},
pages = {13966--13976},
month = {Oct},
year = {2010},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/fedorov_2010_JN_cdk5.pdf},
}
@inproceedings{Jagadeesh10-366
author = {Vignesh Jagadeesh and B. S. Manjunath},
title = {INTERACTIVE GRAPH CUT SEGMENTATION OF TOUCHING NEURONAL STRUCTURES FROM ELECTRON MICROGRAPHS},
booktitle = {IEEE International Conference on Image Processing},
month = {Sep},
year = {2010},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/vigneshICIP2010.pdf},
}
@inproceedings{Koulgi10-355
author = {Pradeep Koulgi and Mehmet Emre Sargin and Kenneth Rose and B. S. Manjunath},
title = {Graphical Model-based Tracking of Curvilinear Structures in Bio-image Sequences},
booktitle = {IEEE International Conference on Pattern Recognition},
month = {Aug},
year = {2010},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/koulgi_ICPR_10.pdf},
}
@inproceedings{Sargin10-352
author = {M.E. Sargin and P. Ghosh and B. S. Manjunath and K. Rose},
title = {Object Tracking with Ratio Cycles Using Shape and Appearance Cues},
booktitle = {IEEE International Conference on Pattern Recognition},
pages = {3649--3652},
month = {Aug},
year = {2010},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/sargin_ICPR_10.pdf},
}
@inproceedings{Ghosh10-350
author = {Pratim Ghosh and M.E. Sargin and B.S. Manjunath},
title = {Generalized Simultaneous Registration and Segmentation},
booktitle = {IEEE Computer Society Conference on Computer Vision and Pattern Recognition},
pages = {1363--1370},
month = {Jun},
year = {2010},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/pratim_CVPR_2010.pdf},
}
@article{Ghosh09-340
author = {Pratim Ghosh and Luca Bertelli and Baris Sumengen and and B.S. Manjunath},
title = {A Non-Conservative Flow Field for Robust Variational Image Segmentation},
journal = {IEEE Transactions on Image Processing},
volume = {19},
number = {2},
pages = {478--490},
month = {Feb},
year = {2010},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/pratim_TIP_2010.pdf},
}
@article{Gelasca09-347
author = {Elisa Drelie Gelasca and Boguslaw Obara and Dmitry Fedorov and Kristian Kvilekval and B. S. Manjunath},
title = {A biosegmentation benchmark for evaluation of bioimage analysis methods},
journal = {BMC Bioinformatics},
volume = {10},
number = {1},
pages = {368},
month = {Nov},
year = {2009},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/gelasca_BMC_2009.pdf},
}
@inproceedings{Sargin09-341
author = {M.E. Sargin and L. Bertelli and B.S. Manjunath and K. Rose},
title = {Probabilistic Occlusion Boundary Detection on Spatio-Temporal Lattices},
booktitle = {12th IEEE International Conference on Computer Vision,},
location = {Kyoto, Japan},
month = {Oct},
year = {2009},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/sargin_iccv_09.pdf},
}
@inproceedings{Ghosh09-339
author = {Pratim Ghosh and Mehmet Emre Sargin and and B.S. Manjunath},
title = {Robust Dynamical Model for Simultaneous Registration and Segmentation in a Variational Framework: A Bayesian Approach},
booktitle = {12th IEEE International Conference on Computer Vision},
location = {Kyoto, Japan},
month = {Oct},
year = {2009},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/pratim_ICCV_2009.pdf},
}
@inproceedings{Bertelli08-312
author = {Luca Bertelli and Pratim Ghosh and B. S. Manjunath and Frederic Gibou},
title = {Reference-based Probabilistic Segmentation as Non-Rigid Registration using Thin Plate Splines},
booktitle = {Proc. IEEE International Conference on Image Processing},
location = {San Diego, CA},
pages = {3052--3055},
month = {Oct},
year = {2008},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/bertelli_ICIP_2008.pdf},
}
@inproceedings{Vu08-309
author = {Nhat Vu and B.S. Manjunath},
title = {Graph Cut Segmentation of Neuronal Structures from Transmission Electron Micrographs},
booktitle = {Proc. IEEE International Conference on Image Processing},
location = {San Diego, CA},
pages = {725--728},
month = {Oct},
year = {2008},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/vu_ICIP_2008.pdf},
}
@inproceedings{Gelasca08-298
author = {Elisa Drelie Gelasca and Jiyun Byun and Boguslaw Obara and B.S. Manjunath},
title = {Evaluation and Benchmark for Biological Image Segmentation},
booktitle = {IEEE International Conference on Image Processing},
location = {San Diego, CA},
pages = {1816--1819},
month = {Oct},
year = {2008},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/elisa_ICIP08.pdf},
}
@phdthesis{Vu08-326
author = {Nhat Bao Sinh Vu},
title = {Image Segmentation with Semantic Priors: A Graph Cut Approach},
booktitle = {Ph.D. Thesis},
location = {University of California, Santa Barbara},
month = {Sep},
year = {2008},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/NhatsThesis.pdf},
}
@article{Bertelli08-291
author = {Luca Bertelli and Baris Sumengen and B.S. Manjunath and Frederic Gibou},
title = {A Variational Framework for Multi-Region Pairwise Similarity-based Image Segmentation},
journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
volume = {30},
number = {8},
pages = {1400--1414},
month = {Aug},
year = {2008},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/bertelli_PAMI_2007.pdf},
}
@inproceedings{Vu2008-303
author = {Nhat Vu and B.S. Manjunath},
title = {Shape Prior Segmentation of Multiple Objects with Graph Cuts},
booktitle = {IEEE Computer Society Conference on Computer Vision and Pattern Recognition},
location = {Anchorage, Alaska, USA},
month = {Jun},
year = {2008},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/Vu_CVPR2008.pdf},
}
@phdthesis{Boucheron08-325
author = {Laura E. Boucheron},
title = {Object- and Spatial-Level Quantitative Analysis of Multispectral Histopathology Images for Detection and Characterization of Cancer},
booktitle = {Ph.D. Thesis},
location = {University of California, Santa Barbara},
month = {Mar},
year = {2008},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/boucheron_dissertation.pdf},
}
@inproceedings{Boucheron08-308
author = {Laura E. Boucheron and Neal R. Harvey and and B. S. Manjunath},
title = {On Using Cytoplasm and Stroma Features in Automated Cancer Diagnosis},
booktitle = {Workshop on Bio-Image Informatics: Biological Imaging, Computer Vision and Data Mining},
location = {Santa Barbara, CA, USA},
month = {Jan},
year = {2008},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/boucheron_BIOW08.pdf},
}
@inproceedings{Byun08-307
author = {Jiyun Byun and DeeAnn Hartung and Stuart Feinstein and B. S. Manjunath},
title = {Quantifying Cell Viability in Cultured Cells},
booktitle = {Workshop on Bio-Image Informatics: Biological Imaging, Computer Vision and Data Mining},
location = {Santa Barbara, CA, USA},
month = {Jan},
year = {2008},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/byun_BIOW08.pdf},
}
@inproceedings{Obara08-306
author = {Boguslaw Obara and Michael Veeman and William Smith and B.S. Manjunath},
title = {Segmentation and analysis of notochord cells in 3D microscope data},
booktitle = {Workshop on Bio-Image Informatics: Biological Imaging, Computer Vision and Data Mining},
location = {Santa Barbara, CA, USA},
month = {Jan},
year = {2008},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/obara_veeman_BIOW08.pdf},
}
@inproceedings{Obara08-305
author = {Boguslaw Obara and Jiyun Byun and Dmitry Fedorov and B. S. Manjunath},
title = {Automatic nuclei detection and dataflow in Bisquik system},
booktitle = {Workshop on Bio-Image Informatics: Biological Imaging, Computer Vision and Data Mining},
location = {Santa Barbara, CA, USA},
month = {Jan},
year = {2008},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/obara_BIOW08.pdf},
}
@inproceedings{Gelasca08-304
author = {Elisa Drelie Gelasca and Jiyun Byun and Boguslaw Obara and B.S. Manjunath},
title = {Benchmark for evaluating biological image analysis tools},
booktitle = {Workshop on Bio-Image Informatics: Biological Imaging, Computer Vision and Data Mining},
location = {Santa Barbara, CA, USA},
month = {Jan},
year = {2008},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/gelasca_BIOW08.pdf},
}
@inproceedings{Bertelli07-292
author = {Luca Bertelli and Marco Zuliani and B.S. Manjunath},
title = {Pairwise Similarities across Images for Multiple View Rigid/Non-Rigid Segmentation and Registration},
booktitle = {IEEE International Conference on Computer Vision (ICCV07)},
location = {Rio de Janeiro, Brazil},
month = {Oct},
year = {2007},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/bertelli_ICCV_2007.pdf},
}
@inproceedings{Bertelli07-280
author = {Luca Bertelli and B.S. Manjunath},
title = {Edge Preserving Filters Using Geodesic Distances on Weighted Orthogonal Domains},
booktitle = {IEEE International Conference on Image Processing 2007 (ICIP07)},
location = {San Antonio, TX},
month = {Sep},
year = {2007},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/bertelli_geodesic_ICIP_2007.pdf},
}
@inproceedings{Sargin07-278
author = {M. E. Sargin and A. Altinok and K. Rose and B.S. Manjunath},
title = {Tracing Curvilinear Structures in Live Cell Images},
booktitle = {IEEE International Conference on Image Processing (ICIP 07)},
location = {San Antonio, TX},
month = {Sep},
year = {2007},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/sargin_icip_07.pdf},
}
@inproceedings{Bertelli07-277
author = {L. Bertelli and Jiyun Byun and B.S. Manjunath},
title = {A Variational Approach to Exploit Prior Information in Object-Background Segregation: Application to Retinal Images},
booktitle = {IEEE International Conference on Image Processing (ICIP 07)},
location = {San Antonio, TX},
month = {Sep},
year = {2007},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/bertelli_ICIP_2007.pdf},
}
@inproceedings{Vu07-273
author = {Nhat Vu and and Pratim Ghosh and B.S Manjunath},
title = {Retina layer segmentation and spatial alignment of antibody expression levels},
booktitle = {International Conference on Image Processing (ICIP'07)},
location = {San Antonio, Texas},
month = {Sep},
year = {2007},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/vu_icip_2007.pdf},
}
@inproceedings{Sargin07-279
author = {M.E. Sargin and A. Altinok and E. Kiris and L. Wilson and S. Feinstein and K. Rose and B.S. Manjunath},
title = {Tracing Microtubules in Live Cell Images},
booktitle = {IEEE International Symposium on Biomedical Imaging (ISBI'07)},
location = {Metro Washington DC, USA},
month = {Apr},
year = {2007},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/sargin_isbi_07.pdf},
}
@techreport{Bertelli06-255
author = {Luca Bertelli and Baris Sumengen and B. S. Manjunath and Frederic Gibou},
title = {A Multi-phase Level Sets framework for Pairwise Similarity-based Image Segmentation},
booktitle = {VRL, ECE},
location = {University of California, Santa Barbara},
month = {Nov},
year = {2006},
}
@article{Sumengen05-211
author = {B. Sumengen and B. S. Manjunath},
title = {Graph Partitioning Active Contours (GPAC) for Image Segmentation},
journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence (PAMI)},
month = {Apr},
year = {2006},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/04PAMIBaris.pdf},
}
@inproceedings{Sumengen05-208
author = {B. Sumengen and B. S. Manjunath},
title = {Category Pruning in Image Databases using Segmentation and Distance Maps},
booktitle = {European Signal Processing Conference (EUSIPCO)},
month = {Sep},
year = {2005},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/05eusipcoBarisPruning.pdf},
}
@inproceedings{Sumengen05-207
author = {B. Sumengen and B. S. Manjunath},
title = {Multi-scale Edge Detection and Image Segmentation},
booktitle = {European Signal Processing Conference (EUSIPCO)},
month = {Sep},
year = {2005},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/05eusipcoBarisMultiscale.pdf},
}
@article{Sumengen05-212
author = {B. Sumengen and B. S. Manjunath},
title = {Edgeflow-driven Variational Image Segmentation: Theory and Performance Evaluation},
journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence (PAMI)},
month = {May},
year = {2005},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/05TechRepBaris_0.pdf},
}
@inproceedings{Saban04-202
author = {M. El Saban and B. S. Manjunath},
title = {Interactive segmentation using curve evolution and relevance feedback},
booktitle = {IEEE International Conference on Image Processing},
location = {Singapore},
month = {Oct},
year = {2004},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/saban_icip2004.pdf},
}
@phdthesis{Sumenge04-199
author = {Baris Sumengen},
title = {Variational Image Segmentation and Curve Evolution on Natural Images},
booktitle = {Ph.D. Thesis},
location = {University of California, Santa Barbara},
month = {Sep},
year = {2004},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/04ThesisSumengen.pdf},
}
@inproceedings{Sumengen04-175
author = {Baris Sumengen and Sitaram Bhagavathy and B. S. Manjunath},
title = {Graph Partitioning Active Contours for Knowledge-Based Geo-Spatial Segmentation},
booktitle = {IEEE CVPR Workshop on Perceptual Organization in Computer Vision (POCV)},
location = {Washington, DC},
month = {Jun},
year = {2004},
url = {https://vision.ece.ucsb.edu/sites/default/files/publications/04pocvBaris.pdf},
}