Center for Bio-Image Informatics

External link: 
http://www.bioimage.ucsb.edu/

Related publications

K. Eliceiri, M. R. Berthold, I. G. Goldberg, L. Ibanez, B. S. Manjunath, M. E. Martone, R. F. Murphy, H. Peng, A. L. Plant, B. Roysam. N. Stuurmann, J. R. Swedlow, P. Tomancak and A. E. Carpenter,
“Biological imaging software tools”,
Nature Methods, vol. 9, pp. 697–710, Nature Publishing Group, Jun. 2012.
[abstract] [BibTex]
Abstract preview: Few technologies are more widespread in modern biological laboratories than imaging. Recent advances in optical technologies and instrumentation are providing hitherto unimagined capabilities. Almost ... more
Robert J. Miller, John Hocevar, Robert P. Stone, Dmitry V. Fedorov,
“Structure-Forming Corals and Sponges and Their Use as Fish Habitat in Bering Sea Submarine Canyons”,
PLoS ONE, vol. 7, no. 3, 2012.
[abstract] [PDF] [BibTex]
Abstract preview: Continental margins are dynamic, heterogeneous settings that can include canyons, seamounts, and banks. Two of the largest canyons in the world, Zhemchug and Pribilof, cut into the edge of the contine ... more
Diego Piedrahita, Israel Hernandez, Alejandro Lopez-Tobon, Dmitry Fedorov, Boguslaw Obara, B. S. Manjunath, Ryan L. Boudreau, Beverly Davidson, Frank LaFerla, Juan Carlos Gallego-Gomez, Kenneth S. Kosik, and Gloria Patricia Cardona-Gomez,
“Silencing of CDK5 Reduces Neurofibrillary Tangles in Transgenic Alzheimer's Mice”,
Journal of Neuroscience, vol. 30, no. 42, pp. 13966-13976, Oct. 2010.
[abstract] [PDF] [BibTex]
Abstract preview: Alzheimer's disease is a major cause of dementia for which treatments remain unsatisfactory. Cyclin-dependent kinase 5 (CDK5) is a relevant kinase that has been hypothesized to contribute to the ... more
Kristian Kvilekval, Dmitry Fedorov, Boguslaw Obara, Ambuj Singh and B.S. Manjunath,
“Bisque: A Platform for Bioimage Analysis and Management”,
Bioinformatics, vol. 26, no. 4, pp. 544-552, Feb. 2010.
[abstract] [PDF] [BibTex]
Abstract preview: Motivation: Advances in the field of microscopy have brought about the need for better image management and analysis solutions. Novel imaging techniques have created vast stores of images and metadata ... more